Changes in version 1.6.3 (2026-01-10) - Updates for compatibility with next version of JAGS. Changes in version 1.6.2 (2024-01-30) - Fix broken tests on CRAN Changes in version 1.6.1 (2024-01-23) - Extensive refactoring of internal code - Don't drop output dimensions when only one parameter saved - Summary method now returns the summary matrix - Add tests - Add vignette Changes in version 1.5.2 (2021-06-18) - Remove View function due to problematic interactions with RStudio - Improvements to traceplot and densityplot - Make sure output is reproducible when parallel=FALSE - Minor bugfixes Changes in version 1.5.1 (2019-07-30) - Fix issue when chains adapted for different numbers of iterations - Fix crash when DIC was requested but JAGS couldn't calculate it - Stop auto-converting 1 row/1 col matrices into vectors - Improve pp.check plotting function - Add some warnings about functions and arguments that will be deprecated soon Changes in version 1.5.0 (2018-09-12) - Fix issues with NAs in parameters. - Fix missing arguments in autojags(). - Handle errors in output processing so that samples are not lost completely. - Make sure a specified random seed is used for initial value functions. - Fix error where summary stats were printed in the wrong order for some parameters. - Don't collapse 1 row/1col matrices into vectors automatically. Changes in version 1.4.9 (2017-12-12) - Fix bug with DIC output introduced in 1.4.7. Changes in version 1.4.8 (2017-11-17) - Minor changes to prep for CRAN submission. - Fix more issues with random seeds and problems with DIC. - Fix issue with setting seed affecting other random number generation. - Allow turning deviance/DIC monitoring on/off when updating an existing model. - Overhaul handling of adaptation; default to running a sequence of adapt() calls until JAGS reports adapation is adequate. Suggest minimum of 1000 adaptation iterations otherwise in man pages. - Change output of summary function. Add ability to control factories. Changes in version 1.4.4 (2016-12-03) - Change default approach to generating random seeds. - Add S3 method for View() - Convert traceplot() to an S3 method from S4. - Fix to allow running in parallel when dependencies are in non-standard libraries. - Fix bug when updating jagsbasic class. Changes in version 1.4.2 (2016-02-22) - Changes to NAMESPACE to get clean build check on R-devel. - Add ability to specify number of CPU cores to use when running in parallel. - Fix a problem where saving output for a single scalar parameter broke output processing. - Fix a problem where nonscalar estimated parameters with missing (i.e., non-estimated) values broke the display of summary stats. - Explicitly import functions from default packages to meet new standards for building with R-devel. - Change minimum required version of rjags to 3-13. Changes in version 1.3.7 (2015-06-11) - Add verbose argument to functions to allow suppression of all text output in the console as the function runs. - Change method for closing connection to clusters when running in parallel to avoid closing unrelated connections. - Adjust output for jags.basic. - Fix problem with max.iter argument in autojags(). Clarify documentation and output for autojags(). - Add option save.all.iter in autojags() function to combine MCMC samples from all iterative updates into final posterior. - Fix issue with calculating stats that sometimes occurred with a constant posterior distribution. - Fix error where autojags did not handle NA rhat values properly. - Added more helpful warning when at least one rhat value = NA. Changes in version 1.3.1 (2015-01-16) - Initial CRAN upload.